CDS

Accession Number TCMCG066C10252
gbkey CDS
Protein Id XP_034585464.1
Location complement(join(3810918..3810930,3811356..3811432,3811501..3811567,3811967..3812089,3812175..3812294,3812930..3813015,3813333..3813443,3813619..3813699,3813862..3813933,3814015..3814193,3814663..3814876))
Gene LOC117848238
GeneID 117848238
Organism Setaria viridis

Protein

Length 380aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA633601
db_source XM_034729573.1
Definition ribosome biogenesis protein NOP53 [Setaria viridis]

EGGNOG-MAPPER Annotation

COG_category S
Description Nop53 (60S ribosomal biogenesis)
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03009        [VIEW IN KEGG]
KEGG_ko ko:K14840        [VIEW IN KEGG]
EC -
KEGG_Pathway ko05168        [VIEW IN KEGG]
map05168        [VIEW IN KEGG]
GOs GO:0000027        [VIEW IN EMBL-EBI]
GO:0000054        [VIEW IN EMBL-EBI]
GO:0000055        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0006403        [VIEW IN EMBL-EBI]
GO:0006405        [VIEW IN EMBL-EBI]
GO:0006611        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006886        [VIEW IN EMBL-EBI]
GO:0006913        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0008104        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0015031        [VIEW IN EMBL-EBI]
GO:0015833        [VIEW IN EMBL-EBI]
GO:0015931        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0019843        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0022613        [VIEW IN EMBL-EBI]
GO:0022618        [VIEW IN EMBL-EBI]
GO:0031503        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0033750        [VIEW IN EMBL-EBI]
GO:0034613        [VIEW IN EMBL-EBI]
GO:0034622        [VIEW IN EMBL-EBI]
GO:0042254        [VIEW IN EMBL-EBI]
GO:0042255        [VIEW IN EMBL-EBI]
GO:0042273        [VIEW IN EMBL-EBI]
GO:0042886        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043933        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045184        [VIEW IN EMBL-EBI]
GO:0046907        [VIEW IN EMBL-EBI]
GO:0050657        [VIEW IN EMBL-EBI]
GO:0050658        [VIEW IN EMBL-EBI]
GO:0051168        [VIEW IN EMBL-EBI]
GO:0051169        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051236        [VIEW IN EMBL-EBI]
GO:0051640        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051649        [VIEW IN EMBL-EBI]
GO:0051656        [VIEW IN EMBL-EBI]
GO:0065003        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070727        [VIEW IN EMBL-EBI]
GO:0070925        [VIEW IN EMBL-EBI]
GO:0071166        [VIEW IN EMBL-EBI]
GO:0071426        [VIEW IN EMBL-EBI]
GO:0071428        [VIEW IN EMBL-EBI]
GO:0071702        [VIEW IN EMBL-EBI]
GO:0071705        [VIEW IN EMBL-EBI]
GO:0071826        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGGGAAGGCGTCGAAGGGCTCGCGGAAGGGGAAGAAGGCGTGGCGCGCCAACATCAGCACCGATGACATCGGCGACTTCTTCGAGAAGCAGACGCGCGACGCCCACGCCGGCGCCGCCGCCATCCCCTCGCTCCCCTCTGATTCCCTTTTCTACGTCGACAAGCCCGCCGCCTCCACTTCGGCCGCCGGCGCCTCCGACACAACCACCAAAGATATTCCTGCCAAAAGGAAGATCGAGAAAAAGAGAGAGAAGGTTCTTTATCACGAGAGTTTGTTGAAGCGGAACCCGTTTATACAGCCAATCCCATCTTCTGTGGTCAGCAAGAAGGATAAGAAGAAGACAAAGAAGAAGGAATTGCACGAGACACAGGGAGACATTAGTGTCCCCATGGAAGATGATTCTGCTGGAAAGAACCTTGACATATGGGCGGGGGATGATAAAGGAGATACTAAGGCTAGAAAGAGATCTACTAAGTCATTGATTCCTGCTGTTGAAGTTGAGCCCCAAGGATGCTCATTTAATCCTCCATTTGAAGCACATCAAGATGCTCTTGCTCAAGCAGTTGCGGATGAAAGGCACAAAACACTCATGAAAGAGTTGGGGCCCACACCTGTACCACTCATAATTTCTGGTGAACCTATAACTGAAGAAGATAAATTCTTCCTTGATGCTGATGATGGAGATGAAGATGTCACGGACGATGATGGAGAACAGGATGCTGATACTTCAGTTGGACAAAGGAAGAACAAAACAAAAAGAGTTACAAGAGTAGAAATGAACAGAAGAGCTCGTCGTAAGGAGAGGTTAAGAGAAGAGGCAGAAGCAAAGAAAATGGAAAGTATTTCAAAAGAAATTGATAGCTTGCCAAATATAATTGATGAGATAGCTAAAGAGGATGAGGAAAAGCAAAAGAGGCGCATACGGCGAACTGTGATTAAAGAGGAGAGGCTTAAATCAGGCCCACCTCGTCTGGGCAGACACAAATTTGAACCAGCTCCTGTTCAAGTTTTATTGACTGAAGAGATTAGTGGCTCTCTTAGAAAGCTAAAGGGGTGTTCTAATCTTACGAGGGATCGCTACAAGAGCATTGAGAAACGAGGATTACTTGCACCAAGCAGGAGAATAAGCAAGCGTCGGTAG
Protein:  
MGKASKGSRKGKKAWRANISTDDIGDFFEKQTRDAHAGAAAIPSLPSDSLFYVDKPAASTSAAGASDTTTKDIPAKRKIEKKREKVLYHESLLKRNPFIQPIPSSVVSKKDKKKTKKKELHETQGDISVPMEDDSAGKNLDIWAGDDKGDTKARKRSTKSLIPAVEVEPQGCSFNPPFEAHQDALAQAVADERHKTLMKELGPTPVPLIISGEPITEEDKFFLDADDGDEDVTDDDGEQDADTSVGQRKNKTKRVTRVEMNRRARRKERLREEAEAKKMESISKEIDSLPNIIDEIAKEDEEKQKRRIRRTVIKEERLKSGPPRLGRHKFEPAPVQVLLTEEISGSLRKLKGCSNLTRDRYKSIEKRGLLAPSRRISKRR